Class InlineCitationSpotter

  • All Implemented Interfaces:
    DRIModule, gate.creole.ANNIEConstants, gate.Executable, gate.LanguageAnalyser, gate.ProcessingResource, gate.Resource, gate.util.FeatureBearer, gate.util.NameBearer, Serializable

    @CreoleResource(name="DRI Modules - In-line citation spotter")
    public class InlineCitationSpotter
    extends gate.creole.AbstractLanguageAnalyser
    implements gate.ProcessingResource, DRIModule
    Validate the annotations of CandidateInlineCitation and CandidateInlineCitationMarker by generating the annotations InlineCitation and InlineCitationMarker
    See Also:
    Serialized Form
    • Nested Class Summary

      • Nested classes/interfaces inherited from class gate.creole.AbstractProcessingResource

        gate.creole.AbstractProcessingResource.InternalStatusListener, gate.creole.AbstractProcessingResource.IntervalProgressListener
    • Field Summary

      • Fields inherited from class gate.creole.AbstractLanguageAnalyser

        corpus, document
      • Fields inherited from class gate.creole.AbstractProcessingResource

        interrupted
      • Fields inherited from class gate.creole.AbstractResource

        name
      • Fields inherited from class gate.util.AbstractFeatureBearer

        features
      • Fields inherited from interface gate.creole.ANNIEConstants

        ANNOTATION_COREF_FEATURE_NAME, DATE_ANNOTATION_TYPE, DATE_POSTED_ANNOTATION_TYPE, DEFAULT_FILE, DOCUMENT_COREF_FEATURE_NAME, JOB_ID_ANNOTATION_TYPE, LOCATION_ANNOTATION_TYPE, LOOKUP_ANNOTATION_TYPE, LOOKUP_CLASS_FEATURE_NAME, LOOKUP_INSTANCE_FEATURE_NAME, LOOKUP_LANGUAGE_FEATURE_NAME, LOOKUP_MAJOR_TYPE_FEATURE_NAME, LOOKUP_MINOR_TYPE_FEATURE_NAME, LOOKUP_ONTOLOGY_FEATURE_NAME, MONEY_ANNOTATION_TYPE, ORGANIZATION_ANNOTATION_TYPE, PERSON_ANNOTATION_TYPE, PERSON_GENDER_FEATURE_NAME, PLUGIN_DIR, SENTENCE_ANNOTATION_TYPE, SPACE_TOKEN_ANNOTATION_TYPE, TOKEN_ANNOTATION_TYPE, TOKEN_CATEGORY_FEATURE_NAME, TOKEN_KIND_FEATURE_NAME, TOKEN_LENGTH_FEATURE_NAME, TOKEN_ORTH_FEATURE_NAME, TOKEN_STRING_FEATURE_NAME
    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      void execute()  
      String getInputCandidateInlineCitationAStype()  
      String getInputCandidateInlineCitationMarkerAStype()  
      boolean resetAnnotations()
      Delete the annotations provided by a module
      void setInputCandidateCitationASname​(String inputCandidateCitationASname)  
      void setInputCandidateInlineCitationAStype​(String inputCandidateInlineCitationAStype)  
      void setInputCandidateInlineCitationMarkerAStype​(String inputCandidateInlineCitationMarkerAStype)  
      • Methods inherited from class gate.creole.AbstractLanguageAnalyser

        getCorpus, getDocument, setCorpus, setDocument
      • Methods inherited from class gate.creole.AbstractProcessingResource

        addProgressListener, addStatusListener, cleanup, fireProcessFinished, fireProgressChanged, fireStatusChanged, getRuntimeParameterValues, getRuntimeParameterValues, init, interrupt, isInterrupted, reInit, removeProgressListener, removeStatusListener
      • Methods inherited from class gate.creole.AbstractResource

        checkParameterValues, flushBeanInfoCache, forgetBeanInfo, getBeanInfo, getInitParameterValues, getInitParameterValues, getName, getParameterValue, getParameterValue, getParameterValues, removeResourceListeners, setName, setParameterValue, setParameterValue, setParameterValues, setParameterValues, setResourceListeners, toString
      • Methods inherited from class gate.util.AbstractFeatureBearer

        getFeatures, setFeatures
      • Methods inherited from interface gate.Executable

        interrupt, isInterrupted
      • Methods inherited from interface gate.util.FeatureBearer

        getFeatures, setFeatures
      • Methods inherited from interface gate.util.NameBearer

        getName, setName
      • Methods inherited from interface gate.ProcessingResource

        reInit
      • Methods inherited from interface gate.Resource

        cleanup, getParameterValue, init, setParameterValue, setParameterValues
    • Constructor Detail

      • InlineCitationSpotter

        public InlineCitationSpotter()
    • Method Detail

      • setInputCandidateCitationASname

        @RunTime
        @CreoleParameter(defaultValue="Analysis",
                         comment="The name of the input annotation set to read citation annotations from")
        public void setInputCandidateCitationASname​(String inputCandidateCitationASname)
      • getInputCandidateInlineCitationAStype

        public String getInputCandidateInlineCitationAStype()
      • setInputCandidateInlineCitationAStype

        @RunTime
        @CreoleParameter(defaultValue="CandidateInlineCitation",
                         comment="The name of the candidate inline citation annotation type, to be searched in the input annotation set")
        public void setInputCandidateInlineCitationAStype​(String inputCandidateInlineCitationAStype)
      • getInputCandidateInlineCitationMarkerAStype

        public String getInputCandidateInlineCitationMarkerAStype()
      • setInputCandidateInlineCitationMarkerAStype

        @RunTime
        @CreoleParameter(defaultValue="CandidateInlineCitationMarker",
                         comment="The name of the candidate inline citation marker annotation type, to be searched in the input annotation set")
        public void setInputCandidateInlineCitationMarkerAStype​(String inputCandidateInlineCitationMarkerAStype)
      • execute

        public void execute()
                     throws gate.creole.ExecutionException
        Specified by:
        execute in interface gate.Executable
        Overrides:
        execute in class gate.creole.AbstractProcessingResource
        Throws:
        gate.creole.ExecutionException
      • resetAnnotations

        public boolean resetAnnotations()
        Description copied from interface: DRIModule
        Delete the annotations provided by a module
        Specified by:
        resetAnnotations in interface DRIModule
        Returns: